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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789294.1_cds_XP_016495627.1_930
CDS Infomation

[gene=LOC107814689] [db_xref=GeneID:107814689] [protein=zingipain-2-like] [protein_id=XP_016495627.1] [location=complement(join(20957..21525,21826..22276))] [gbkey=CDS]
Sequence

ATGGCTATGAAAATCAATTTGATCAGTGTTCTAATATTGTTCTTTGTAATTGGCATGTAC
AAATCTCATGCAACTGCTCGAAACCTGCAGCCAGCTGAATTGTCTGTGTCTGAGAGACAC
GAGCTGTGGATGGCACGTCATGGACGAGTTTACAAGGATGAAGCAGAAAAAGGAAAACGA
CTCATGATATTTAAAGAAAACATGCAATTCATTGAGTCAGTCAACAGGGCAGGAAATCTG
TCTTATAAGTTAGGCATCAATGAATTTGCTGATATTACTTCAGAAGAGTTTTTTGCCAGG
TATACTGGATTAAACATGCCTTCACACCTTCCATCTTCTCCAATATCGTCGACGGAATTC
AAGATTAATGATCTAACTGATGACATGCCGTCTAACTTGGATTGGAGAGAGAAAGGAGCT
GTCACTGAAGTGAAGCAGCAAGGTCACTGTGGATGTTGCTGGGCATTCTCTGCAGTTGGA
GCACTAGAAGGAGCATACCAAATTGCAACAGGCCAAAAGGTGGAACTTTCTGAGCAAGAA
CTTCTCGATTGCACCACCAATAACAATGGCTGCAACGGAGGATTTATGACCAATGCATTT
GAGTTCATCATACAAAATGGTGGAATTTCCACTGAATCAGACTACCCTTATGAAACGCAA
CAAGACACATGCAGAAGCCAAGAGCTCACACCAGCAGTTAAAATAAGTAGCTATCAAGTT
GTGCCTGAAAGTGAAACAGCATTATTGCAAGCCGTAACTCAACAACCAGTGTCAATTGGA
ATTTCTGCTAGCCAAGAGTTCCAATTCTACCAAGGAGGAACTTATCAAGGAAGTTGCGCA
GATCGAATTAACCATGCTGTTACAGCGATAGGATATGGAACTGATGAACAAGGTCAAAAT
TATTGGTTATTGAAGAATTCATGGGGAACATCTTGGGGTGAGAATGGATTCATGAGAATT
ATAAGAGGTACTGGAGGTCACTGTGACATCACCAAGTTGTCTTCTTATCCAGTCATTTAA

Peptide Sequence

PEP ID

XP_016495627.1
PEP Infomation

PREDICTED: zingipain-2-like [Nicotiana tabacum]
Sequence

MAMKINLISVLILFFVIGMYKSHATARNLQPAELSVSERHELWMARHGRVYKDEAEKGKR
LMIFKENMQFIESVNRAGNLSYKLGINEFADITSEEFFARYTGLNMPSHLPSSPISSTEF
KINDLTDDMPSNLDWREKGAVTEVKQQGHCGCCWAFSAVGALEGAYQIATGQKVELSEQE
LLDCTTNNNGCNGGFMTNAFEFIIQNGGISTESDYPYETQQDTCRSQELTPAVKISSYQV
VPESETALLQAVTQQPVSIGISASQEFQFYQGGTYQGSCADRINHAVTAIGYGTDEQGQN
YWLLKNSWGTSWGENGFMRIIRGTGGHCDITKLSSYPVI

Transcript Sequence

Gene sequence data has not been registered.